Insertion junction: CLIP2.042509_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042509
Chromosome:chromosome 12
Location:5978898
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534100 COL,CON2 (1 of 3) PTHR31319//PTHR31319:SF10 - FAMILY NOT NAMED // ZINC FINGER PROTEIN CONSTANS-RELATED; CONSTANS-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCTCGGAGAGGGACGCTTTCCGCCGCAGTGCAGGGTTATTTGGACAG
Internal bar code:ATAGTGTGGTACGTGGATGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2190
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGAATTTACGCGCTTGGG
Suggested primer 2:CCTCACGAGCTGAGTTTGGT