Insertion junction: CLIP2.042515_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042515
Chromosome:chromosome 9
Location:3097329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394065 FAP414 (1 of 2) K18635 - protein SPIRAL1 and related proteins (SPR1); Flagellar Associated Protein 414 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCAATGTTAGGGTGTTGCAGTGGAATAGCCCGGTGTAGAGTGCGTGT
Internal bar code:AGTCTTCTGAAAGGTGTTACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1244
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCAGGCAGGATCCAAAAT
Suggested primer 2:TTTGTCTGCACTGCAATGGC