Insertion junction: CLIP2.042517_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042517
Chromosome:chromosome 2
Location:6217463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386800 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGAACGCCACCCCACCACCCCATTCCGCACCTCTCGCCTCTCAGGG
Internal bar code:CCCTATACAGACGCGATCATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1574
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCAAACAGCACAACAGG
Suggested primer 2:GCGTCAGGAGGAGCAGTATC