Insertion junction: CLIP2.042523_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042523
Chromosome:chromosome 1
Location:7335832
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCTGGGCGGCGGCCACCATTGCGGCCGTCCACGTGCGGGACCTACC
Internal bar code:TCACTAGTGTCTAGAGCTCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:389
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACATTCCACCGTCCACTGTC
Suggested primer 2:TTGCGAACGTGAAGTTGCAG