Insertion junction: CLIP2.042526_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042526
Chromosome:chromosome 2
Location:1596829
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085000 (1 of 1) PTHR22847//PTHR22847:SF423 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCTCCGGCGCCGCGGCCGCCGCGTACACCTTGGGTGTGTGATAGAGA
Internal bar code:ACGAGCTAGGGGGTCGATCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1537
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACAACACCCTTGCAACC
Suggested primer 2:AGTCTTGCCTCAATTCCCCG