Insertion junction: CLIP2.042531_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042531
Chromosome:chromosome 12
Location:3819910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514800 (1 of 2) K06287 - septum formation protein (maf) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGTGTGAATGCGCGAGCCAATATAAGCATGTGTTTGAACTCACTGGAC
Internal bar code:TTTACTGGGCCGCTGCTGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2918
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGCAACACACAGGTTGG
Suggested primer 2:ATAGAACACCTCGCCCTCCT