Insertion junction: CLIP2.042532_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042532
Chromosome:chromosome 16
Location:1342353
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651801 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCACTGGCGGGCCGCCGGCGGCCTTAAAGATGGTGGCGGCTCCGGTTGG
Internal bar code:TCTCGCGTGCTGTATCAGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5617
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGACACCACTTTACCCTG
Suggested primer 2:CAGCAGCCACTACTTCCCAA