Insertion junction: CLIP2.042532_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042532
Chromosome:chromosome 16
Location:1342360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651801 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTGCCGTCATCGCCGTCGGCGCCCATCAAAGCTGGACGACGTAGACGC
Internal bar code:AGGTCCCGTCTGGTTCTCCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3793
LEAP-Seq percent confirming:92.1053
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAGCCACTACTTCCCAA
Suggested primer 2:AGCGACACCACTTTACCCTG