Insertion junction: CLIP2.042539_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042539
Chromosome:chromosome 3
Location:8516430
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g211521 FAP165 (1 of 1) IPR006015//IPR006016//IPR014729 - Universal stress protein A // UspA // Rossmann-like alpha/beta/alpha sandwich fold; Flagellar Associated Protein 165 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCTTGCCCCTTTCCCACATGTCGTGCTCCTGGCCCGACGCTCCCTGC
Internal bar code:GTGCGATTACCTGTCTCAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1108
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CACGAACCTGTGCCAACTTG
Suggested primer 2:TAGGTGGGTCAGATGGGAGG