Insertion junction: CLIP2.042540_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042540
Chromosome:chromosome 17
Location:1453421
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706550 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAAACCATCAGGTTGGCTCGCATGTCAGATGGGGACGAAATGAGTGC
Internal bar code:GCGAAACGTAGTACGTAGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1081
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGCCCCTCAGCCCCTAAT
Suggested primer 2:CACACCCCTACACACATCCC