Insertion junction: CLIP2.042541_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042541
Chromosome:chromosome 10
Location:5149262
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455551 3'UTR_intron
Cre10.g801176 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGCAACACGCGCAATGCACAGCACGAGCGCATCGGGCCGCCAGCTTG
Internal bar code:AACAGAGCTGGTCAGAATCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1876
LEAP-Seq percent confirming:23.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCAGGGAAGCGAAAAGG
Suggested primer 2:CTCTGACTGTGGGTCTGCAG