Insertion junction: CLIP2.042544_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042544
Chromosome:chromosome 16
Location:1503780
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653000 (1 of 1) K18404 - tudor domain-containing protein 3 (TDRD3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTCCGGCTGCGGCCATCGCCGCCGCCGCCGCAGCGGCCGCGGCCGCA
Internal bar code:AGAGGTGGAAAAGCTCGCCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2380
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ATAAGCACAACCGGGGAAGG
Suggested primer 2:CGCCATCATCGTAGTCGTCA