Insertion junction: CLIP2.042551_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042551
Chromosome:chromosome 6
Location:2565295
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269601 (1 of 3) 2.4.1.19 - Cyclomaltodextrin glucanotransferase / Cyclodextrin glycosyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGAGGCGATGCCCGGGGCATGCACGGATGCTCTGGTGGAGGTGGACGA
Internal bar code:ACTGAAGGGGGAGGTGGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1484
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGCGGTTTGACAGTGAC
Suggested primer 2:GTCACTGTCAAACCGCACAC