Insertion junction: CLIP2.042555_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042555
Chromosome:chromosome 16
Location:704119
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691353 (1 of 14) PF13371 - Tetratricopeptide repeat (TPR_9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCAGAATCTGAGTTCCGCCCTTGGGGTGCAGCCACCGTCGGCCTCGG
Internal bar code:ACCAGGGGATATTTATCGAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1713
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATGCTGGGTGCCTTAAG
Suggested primer 2:ACCGTAGTTGACCGTCACAC