Insertion junction: CLIP2.042556_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042556
Chromosome:chromosome 6
Location:5280070
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g284450 PPP24 (1 of 2) K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP); Phosphoprotein phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTTGCCCCGAGCACGGTCCGCACGTCGGGCGCGTGCTCCAGCTCGTTG
Internal bar code:AAAGACCAGTGGTATTATATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2087
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCTGAATCTGACCCGCCC
Suggested primer 2:GTGCTGCAACTGCTATACGC