Insertion junction: CLIP2.042560_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042560
Chromosome:chromosome 10
Location:1249373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426600 CYP739A6,CYP27 Cytochrome P450, CYP213 superfamily; (1 of 8) PTHR24286//PTHR24286:SF77 - FAMILY NOT NAMED // ABSCISIC ACID 8'-HYDROXYLASE 4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGAAGGAGCCTGGGGCGAGGAGGAACAGGAGGATGTGGGTCCGCGTGT
Internal bar code:AGGTTATTCAACGTATCTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2034
LEAP-Seq percent confirming:94.6429
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACTAGCGCTGCATGTAC
Suggested primer 2:CACGTGGAAGCAAGTGTTGG