Insertion junction: CLIP2.042560_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042560
Chromosome:chromosome 10
Location:1249374
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426600 CYP739A6,CYP27 Cytochrome P450, CYP213 superfamily; (1 of 8) PTHR24286//PTHR24286:SF77 - FAMILY NOT NAMED // ABSCISIC ACID 8'-HYDROXYLASE 4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGATGTATTCCTACCTCCTGCACTGCCTGGACCCGGTGCTGTGGGACG
Internal bar code:TTTAGTCGGACTGGATACCGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1421
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTGGAAGCAAGTGTTGG
Suggested primer 2:GCAACTAGCGCTGCATGTAC