Insertion junction: CLIP2.042563_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042563
Chromosome:chromosome 6
Location:1319051
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g259050 (1 of 1) PTHR24365:SF279 - PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCCCTCCTGTGCATGCGCCGCCGCTCTCACCGTGTAGTCGACCCACAA
Internal bar code:GTATTACCTTGTCATTCTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:770
LEAP-Seq percent confirming:67.2414
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTTCCAGAGTTTCTCGC
Suggested primer 2:TTCTCCAGCAGCTGTGAAGG