Insertion junction: CLIP2.042567_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042567
Chromosome:chromosome 5
Location:967520
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247000 (1 of 1) PF00439//PF00628//PF02791 - Bromodomain (Bromodomain) // PHD-finger (PHD) // DDT domain (DDT) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAACACTAGTTTGGGCTGGTATGTACAAAACCCCCAGCCAAGCACCTC
Internal bar code:AGGACGTACATGCGCTCATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1083
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAACACCCCTTCCCCTCTTC
Suggested primer 2:CCCTTTCCAGTGCATCCTGT