Insertion junction: CLIP2.042568_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042568
Chromosome:chromosome 7
Location:991817
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319452 PHC73 Putative pherophorin-chlamydomonas homolog; (1 of 2) IPR003072//IPR003882 - Orphan nuclear receptor, NOR1 type // Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAATCACGCCGTCCGTCTTGGACCCCACCCCCCTCCCCGCCCTTCCCG
Internal bar code:TCTCGATACTAATCGTTTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1655
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCCACCAAGCCTATTCAC
Suggested primer 2:GGTGAAGGCGAAGGGAGTG