Insertion junction: CLIP2.042572_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042572
Chromosome:chromosome 13
Location:4923154
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605500 (1 of 9) PTHR11258//PTHR11258:SF11 - 2-5 OLIGOADENYLATE SYNTHETASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATCTATCAGGCTGCTTGCATTTCGCAGACGAGAGGGCACAGGGAGTC
Internal bar code:TATTAACCCAGTCTAAATGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3532
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGAACACAGACAGGTCGACA
Suggested primer 2:TTATCAAGCTAGCGAGGGCG