Insertion junction: CLIP2.042572_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042572
Chromosome:chromosome 13
Location:4923162
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605500 (1 of 9) PTHR11258//PTHR11258:SF11 - 2-5 OLIGOADENYLATE SYNTHETASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTACCATCTTGAGTGTGCGGTGTGGGTCGCCAGCGCTGATCGGTGGGAA
Internal bar code:TATTAACCCAGTCTAAATGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1512
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTATCAAGCTAGCGAGGGCG
Suggested primer 2:CGAACACAGACAGGTCGACA