Insertion junction: CLIP2.042576_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042576
Chromosome:chromosome 15
Location:932341
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g639900 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACGTACAGATCAGGGCCACAACCAAGGACTGCAGCAGCAACAGGAATA
Internal bar code:AGATAGGGTCTTGTATCATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4091
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GGAATCTGATGAGGAGGGCG
Suggested primer 2:TGTCATGCGTATCATCCCGG