Insertion junction: CLIP2.042579_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042579
Chromosome:chromosome 13
Location:443117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g564850 (1 of 1) PTHR31651:SF3 - AUXIN EFFLUX CARRIER FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGAGGAAGATGTAGGCGAGCGGGAACTGAATGAGAGTGGCTATGAAGT
Internal bar code:TTTCTTGATCAAGAACAGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1454
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTTTAACGCACACAACG
Suggested primer 2:TCTTCATGAACGGCTCACCC