Insertion junction: CLIP2.042593_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042593
Chromosome:chromosome 9
Location:6345735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414350 (1 of 3) PF04824//PF04825 - Conserved region of Rad21 / Rec8 like protein (Rad21_Rec8) // N terminus of Rad21 / Rec8 like protein (Rad21_Rec8_N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCATGCACACACGTCCCCTCCTTGACCCTCCCGGAACTAGCTTTTCCGT
Internal bar code:GGGGTCGATGTATCTATAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5113
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTCTACGCAGCACAGCT
Suggested primer 2:TAGTCAGGCCTGAGCTCCAT