Insertion junction: CLIP2.042599_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042599
Chromosome:chromosome 3
Location:8915906
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204913 (1 of 2) PTHR21580//PTHR21580:SF21 - SHIPPO-1-RELATED // O(6)-METHYLGUANINE-INDUCED APOPTOSIS 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACTGCCCCACACGACCGCTGCAGGCGAGTACAGCCGGCCGGCCAGCCC
Internal bar code:GACTCTTTTCGACGCGTGACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:631
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGAAATGCTGGTCCTCCT
Suggested primer 2:CGGCTGTGTGTTGGGAGTAT