Insertion junction: CLIP2.042606_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042606
Chromosome:chromosome 5
Location:2174689
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237283 (1 of 7) IPR020850 - GTPase effector domain, GED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCCACACGCGCCCCCAGTACCCCGCCGCACCAGTCATTAAACCTCCA
Internal bar code:CTAGCTCGCTACAGACAACCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1203
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGCATCGATGAGCTTTG
Suggested primer 2:AGGGCAAGCTTAATGGGCAT