Insertion junction: CLIP2.042606_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042606
Chromosome:chromosome 5
Location:2174712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237283 (1 of 7) IPR020850 - GTPase effector domain, GED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGTGGGGGCAGGGGTGGCACGAGCCCTGGCGGCCGTACGCCACATGC
Internal bar code:CTAGCTCGCTACAGACAACCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3799
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCAAGCTTAATGGGCAT
Suggested primer 2:CACGGCATCGATGAGCTTTG