Insertion junction: CLIP2.042607_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042607
Chromosome:chromosome 16
Location:3794010
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g688500 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGGCCTCCGGTATCGAGGAGCAGGTGGCGGAGGCGCGGGCTGCCGCCA
Internal bar code:GATGGTTGCAAATTTCCCTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1857
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GATCTGGAGATGACGGCTCG
Suggested primer 2:TGTAGATCCTCCTGCCACGA