Insertion junction: CLIP2.042608_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042608
Chromosome:chromosome 16
Location:2857722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662951 (1 of 1) PF06985//PF12796//PF13637 - Heterokaryon incompatibility protein (HET) (HET) // Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCCCCCACCCATCCCCATCGCAAGGACTGACACCCTTCCGTGTGCCA
Internal bar code:CGGAATAGGGACTGGCGGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:579
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTTTGCTTCAAGCCGCTG
Suggested primer 2:CGAATCTTGCCAGTCCCCTT