Insertion junction: CLIP2.042609_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042609
Chromosome:chromosome 3
Location:6642775
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195050 (1 of 1) PTHR11732//PTHR11732:SF263 - ALDO/KETO REDUCTASE // SUBFAMILY NOT NAMED outside_mRNA
Cre03.g800368 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGAAGAGGCTGACGTGGATGATCCCACGATTGCGGCGGCTGCGGAGGC
Internal bar code:TTTAAGTATATCGTAATGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2543
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ATACAGCTCAACCGGTGCAA
Suggested primer 2:TCCATGAACGCTACCCCAAC