Insertion junction: CLIP2.042610_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042610
Chromosome:chromosome 12
Location:9445924
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAACAGGCAACAGTGCATGGTATGCGGAGTCAGCGCTAAAGAGCCTT
Internal bar code:ATCCGGATGCGCGCCCAGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3966
LEAP-Seq percent confirming:91.2088
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGATCTCGCGGTATTCC
Suggested primer 2:CACTGTCACGCTCAGTCCTT