Insertion junction: CLIP2.042610_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042610
Chromosome:chromosome 12
Location:9445924
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCGAGAGGTGCGTGATCCGCTGCCGCGATGCCTTCGGCATTCCCAGG
Internal bar code:ATCCGGATGCGCGCCCAGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1368
LEAP-Seq percent confirming:58.3333
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGTCACGCTCAGTCCTT
Suggested primer 2:ACACGATCTCGCGGTATTCC