Insertion junction: CLIP2.042612_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042612
Chromosome:chromosome 2
Location:3548341
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099300 ANK21 (1 of 15) PF13857 - Ankyrin repeats (many copies) (Ank_5); Predicted protein with ankyrin repeats intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGCCCCGCCCCCGCGCCACTGCCGGCACACCTTGACGACACCGGCCG
Internal bar code:TTAATTTTGATAACTAAAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2859
LEAP-Seq percent confirming:85.2459
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTCACAAACACCAGCAA
Suggested primer 2:GACTGGATGTTCCCCTGTGG