Insertion junction: CLIP2.042618_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042618
Chromosome:chromosome 9
Location:2738911
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391450 HCP1 (1 of 4) 1.7.99.1 - Hydroxylamine reductase / Hydroxylamine (acceptor) reductase; Hybrid-cluster protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCCGTGCCCACGCCCGTCACGCTCAACCCCGTGCCCGGCAAGGCCAT
Internal bar code:ATCCCGTTGTACTCAGCCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:833
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTCAGGCCGACGAGTAAA
Suggested primer 2:AGCCCTGGTTTGGATCCATG