Insertion junction: CLIP2.042622_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042622
Chromosome:chromosome 11
Location:3874363
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479600 MHX1,CAX6 (1 of 1) K05849 - solute carrier family 8 (sodium/calcium exchanger) (SLC8A, NCX); putative Ca2+/Na+ exchanger intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCGTACGTGGGAGGCTTTACGTTTCTGCATATCCCTCACGCTAGAC
Internal bar code:CTACTACAATTCAGTATCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2514
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACGCACCAGTTCCAAAC
Suggested primer 2:AGGGTTTCTCAATGCGAGGG