Insertion junction: CLIP2.042631_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042631
Chromosome:chromosome 16
Location:7809280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g688302 (1 of 1) K08999 - hypothetical protein (K08999) CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGGGTTGTGAAGATCCGCATCACCGACATTGTGGCAAACACCTACTA
Internal bar code:AAAGTTACGGACCTACCAGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1786
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCATGCAGCTTACGCAA
Suggested primer 2:GGTTTCGTCGAGGTCAAGGT