Insertion junction: CLIP2.042632_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042632
Chromosome:chromosome 5
Location:786314
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g245700 ANK25 (1 of 4) PF06985//PF12796 - Heterokaryon incompatibility protein (HET) (HET) // Ankyrin repeats (3 copies) (Ank_2); Predicted protein with ankyrin repeats intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGACCATGTGTGAAAGAGTGCCCTCTACGTTATGGCTAATGAAGCTAG
Internal bar code:CGGTGGTTATGTTAGACTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:351
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CATACCGGTCACACCACACA
Suggested primer 2:TAGGCGCATGTTAGCTAGGC