Insertion junction: CLIP2.042637_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042637
Chromosome:chromosome 14
Location:1293977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g616450 CYG46 (1 of 2) PF00211//PF03924 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // CHASE domain (CHASE); Adenylate/guanylate cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATCATCGGCGTAGCTTGCGTGCCTCGTCGAGCTCACTGGCCCCCGCC
Internal bar code:TGCACGGATTCTCGGGTTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1804
LEAP-Seq percent confirming:23.4043
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGAGCTGTCGCACTAAA
Suggested primer 2:GTTGGCATATTCGGCTGCTG