Insertion junction: CLIP2.042649_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042649
Chromosome:chromosome 6
Location:1074326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g257351 3'UTR
Cre06.g257400 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTGACAATGGCAGGCCAGGCGCCCGCCAGTGGGCACACTGAGGAGAA
Internal bar code:AAGTAGGAACTGTCGCATAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:969
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTGAGTGAGGTAAGCAC
Suggested primer 2:GTCATCCAGCCGTGGTGTAA