Insertion junction: CLIP2.042652_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042652
Chromosome:chromosome 12
Location:2240681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508650 (1 of 2) PF02010 - REJ domain (REJ) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATGATGGCAAGCATGGATGGGAAGGCCAAGCAATGGCAACGGCGCTG
Internal bar code:AGTCCAGACAAAGCTTGGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:767
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCCAACCTGATGTCCTT
Suggested primer 2:GCCGACTGTCGAAGAAGTGA