Insertion junction: CLIP2.042656_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042656
Chromosome:chromosome 14
Location:613766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611950 PPR-superfamily protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTGTGCGTGTGCATATGTGTGTGTCAGAGAATCGCAACAAGGACAAG
Internal bar code:GGGGCTGCGACCTGCGATTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1185
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCTTACTATGCGCACAC
Suggested primer 2:GGACAAAGAGGGGACATGGG