Insertion junction: CLIP2.042659_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042659
Chromosome:chromosome 3
Location:7261907
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207500 CDS
Cre03.g207502 (1 of 7) K18932 - palmitoyltransferase (ZDHHC) 3'UTR
Cre03.g207550 ADH8,CAD2 Cinnamyl-alcohol dehydrogenase; (1 of 2) 1.1.1.195 - Cinnamyl-alcohol dehydrogenase / CAD outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGTTATGAAACATACGACCCCTTCCCTGCAAACAGAAATCGCGGAATC
Internal bar code:AGTGCATTCTCTCTCAACGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1114
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCAATTACGTGTAGCGG
Suggested primer 2:CGTTTCGGCATCGTCCATTC