Insertion junction: CLIP2.042665_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042665
Chromosome:chromosome 13
Location:3732516
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g588550 SYP1 Plasma membrane Qa-SNARE, Syx1/Sso1/Syntaxin1/Syp1 family (Qa.IV); (1 of 1) K08486 - syntaxin 1B/2/3 (STX1B_2_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTAGCTCGCTCATAAGCGGGTCAATGTCATCGGTAGCTACCCAAAACCG
Internal bar code:GGGTTCAGAAGCAAAGCTGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:538
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTAAACCCCATCACCCCCAC
Suggested primer 2:GACCTAAATGTCGCGTTCGC