Insertion junction: CLIP2.042669_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042669
Chromosome:chromosome 9
Location:3843635
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801034 (1 of 1) K08736 - DNA mismatch repair protein MSH3 (MSH3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCGAGTGGGCGTGGTGCGGCAGGTGCGCGCGGGCGTGAGGGGGACAC
Internal bar code:ATCGAAACTCAATGAGGAATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:188
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTCACCGACTTTGTCCG
Suggested primer 2:ACAGCTCACAACCCCTATGC