Insertion junction: CLIP2.042673_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042673
Chromosome:chromosome 4
Location:336067
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217904 mL118,MRPL118,OPR133 mitochondrial ribosome protein mL118, Chlamydomonas-specific; (1 of 781) IPR000104 - Antifreeze protein, type I intron
Cre04.g217905 (1 of 173) IPR029058 - Alpha/Beta hydrolase fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTTCCATCAAGCAGTCCGCACTCGCTTGCGGGTGTTTGTGTGCATAA
Internal bar code:CCCCTTCGGAATTTTATCGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:387
LEAP-Seq percent confirming:15.3846
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GATGTTGATGTTGACCGCGG
Suggested primer 2:CTGTTCTGAATTCTGCGCCG