Insertion junction: CLIP2.042674_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042674
Chromosome:chromosome 2
Location:3196696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800211 (1 of 3) IPR000104//IPR020846 - Antifreeze protein, type I // Major facilitator superfamily domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTGCAGAGGAGGAGGAAGGGAAGGAGGAGAGGGGGAATGTGGAGGCA
Internal bar code:CACTACTATCTCAAAAGTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1130
LEAP-Seq percent confirming:66.0377
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:AGTATCGCGACACAGGCAAA
Suggested primer 2:CACACCCACACCCACTAGAC