Insertion junction: CLIP2.042680_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042680
Chromosome:chromosome 11
Location:978214
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467663 (1 of 1) IPR002909//IPR014756//IPR019316 - IPT domain // Immunoglobulin E-set // G8 domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCTGGATGACTGTCACGGTCACACCCGCCGGTCGCACACCCAGCGCG
Internal bar code:ACGTATAGCATGTATTCATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1591
LEAP-Seq percent confirming:24.4444
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:68
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAAGGAGCTGCTCGCAAT
Suggested primer 2:CGGCTACCACCCTTTTGACT