Insertion junction: CLIP2.042688_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042688
Chromosome:chromosome 13
Location:3849316
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTTGGCGAGATTCGGGGACCGCATGCAGCCCCACGCGGCGAGATTGCA
Internal bar code:TCGGCCAGGGCCTAGATACGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:6374
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGCTCGTTTGCATGTAG
Suggested primer 2:CGGACTACGGATCTGACACG