Insertion junction: CLIP2.042695_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042695
Chromosome:chromosome 1
Location:5404867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038100 BES1 (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin); putative chloride channel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGCCCATTGGTTTACGGTTGGTTTTGCGTTGATCGGTCAAAAAATGC
Internal bar code:TATTCGAATGGTGCTGATAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3115
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGGAGGACTATGGGCAT
Suggested primer 2:CACCACATTCAAAGCGGCAA